Zoonotic origin and transmission of Middle East respiratory syndrome coronavirus in the UAE
Identifieur interne : 000B16 ( Main/Exploration ); précédent : 000B15; suivant : 000B17Zoonotic origin and transmission of Middle East respiratory syndrome coronavirus in the UAE
Auteurs : C. R. Paden [États-Unis] ; M. F. B. M. Yusof [Émirats arabes unis] ; Z. M. Al Hammadi [Émirats arabes unis] ; K. Queen [États-Unis] ; Y. Tao [États-Unis] ; Y. M. Eltahir [Émirats arabes unis] ; E. A. Elsayed [Émirats arabes unis] ; B. A. Marzoug [Émirats arabes unis] ; O. K. A. Bensalah [Émirats arabes unis] ; A. I. Khalafalla [Émirats arabes unis] ; M. Al Mulla [Émirats arabes unis] ; A. Khudhair [Émirats arabes unis] ; K. A. Elkheir [Émirats arabes unis] ; Z. B. Issa [Émirats arabes unis] ; K. Pradeep [Émirats arabes unis] ; F. N. Elsaleh [Émirats arabes unis] ; H. Imambaccus [Émirats arabes unis] ; J. Sasse [Émirats arabes unis] ; S. Weber [Émirats arabes unis] ; M. Shi [Australie] ; J. Zhang [États-Unis] ; Y. Li [États-Unis] ; H. Pham [États-Unis] ; L. Kim [États-Unis] ; A. J. Hall [États-Unis] ; S. I. Gerber [États-Unis] ; F. I. Al Hosani [Émirats arabes unis] ; S. Tong [États-Unis] ; S. S. M. Al Muhairi [Émirats arabes unis]Source :
- Zoonoses and public health [ 1863-1959 ] ; 2017.
Descripteurs français
- KwdFr :
- MESH :
- génétique : Coronavirus du syndrome respiratoire du Moyen-Orient.
- virologie : Chameaux, Infections à coronavirus.
- épidémiologie : Infections à coronavirus, Zoonoses, Émirats arabes unis.
- Animaux, Génome viral, Humains, Phylogénie.
English descriptors
- KwdEn :
- MESH :
- epidemiology : Coronavirus Infections, United Arab Emirates.
- genetics : Middle East Respiratory Syndrome Coronavirus.
- transmission : Zoonoses.
- virology : Camelus, Coronavirus Infections.
- Animals, Genome, Viral, Humans, Phylogeny.
Abstract
Since the emergence of Middle East respiratory syndrome coronavirus (MERS-CoV) in 2012, there have been a number of clusters of human-to-human transmission. These cases of human-to-human transmission involve close contact and have occurred primarily in healthcare settings, and they are suspected to result from repeated zoonotic introductions. In this study, we sequenced whole MERS-CoV genomes directly from respiratory samples collected from 23 confirmed MERS cases in the United Arab Emirates (UAE). These samples included cases from three nosocomial and three household clusters. The sequences were analysed for changes and relatedness with regard to the collected epidemiological data and other available MERS-CoV genomic data. Sequence analysis supports the epidemiological data within the clusters, and further, suggests that these clusters emerged independently. To understand how and when these clusters emerged, respiratory samples were taken from dromedary camels, a known host of MERS-CoV, in the same geographic regions as the human clusters. Middle East respiratory syndrome coronavirus genomes from six virus-positive animals were sequenced, and these genomes were nearly identical to those found in human patients from corresponding regions. These data demonstrate a genetic link for each of these clusters to a camel and support the hypothesis that human MERS-CoV diversity results from multiple zoonotic introductions.
Url:
DOI: 10.1111/zph.12435
PubMed: 29239118
PubMed Central: 5893383
Affiliations:
- Australie, Émirats arabes unis, États-Unis
- Géorgie (États-Unis), Nouvelle-Galles du Sud, Tennessee
- Sydney
- Université de Sydney
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Le document en format XML
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Weber</name><affiliation wicri:level="1"><nlm:aff id="A5">Sheikh Khalifa Medical City, Abu Dhabi, United Arab Emirates</nlm:aff><country xml:lang="fr">Émirats arabes unis</country><wicri:regionArea>Sheikh Khalifa Medical City, Abu Dhabi</wicri:regionArea><wicri:noRegion>Abu Dhabi</wicri:noRegion></affiliation></author><author><name sortKey="Shi, M" sort="Shi, M" uniqKey="Shi M" first="M." last="Shi">M. Shi</name><affiliation wicri:level="4"><nlm:aff id="A6">The University of Sydney, Sydney, NSW, Australia</nlm:aff><country xml:lang="fr">Australie</country><wicri:regionArea>The University of Sydney, Sydney, NSW</wicri:regionArea><orgName type="university">Université de Sydney</orgName><placeName><settlement type="city">Sydney</settlement><region type="état">Nouvelle-Galles du Sud</region></placeName></affiliation></author><author><name sortKey="Zhang, J" sort="Zhang, J" uniqKey="Zhang J" first="J." last="Zhang">J. Zhang</name><affiliation wicri:level="2"><nlm:aff id="A1">Division of Viral Diseases, Centers for Disease Control and Prevention, Atlanta, GA, USA</nlm:aff><country xml:lang="fr">États-Unis</country><wicri:regionArea>Division of Viral Diseases, Centers for Disease Control and Prevention, Atlanta, GA</wicri:regionArea><placeName><region type="state">Géorgie (États-Unis)</region></placeName></affiliation></author><author><name sortKey="Li, Y" sort="Li, Y" uniqKey="Li Y" first="Y." last="Li">Y. Li</name><affiliation wicri:level="2"><nlm:aff id="A1">Division of Viral Diseases, Centers for Disease Control and Prevention, Atlanta, GA, USA</nlm:aff><country xml:lang="fr">États-Unis</country><wicri:regionArea>Division of Viral Diseases, Centers for Disease Control and Prevention, Atlanta, GA</wicri:regionArea><placeName><region type="state">Géorgie (États-Unis)</region></placeName></affiliation></author><author><name sortKey="Pham, H" sort="Pham, H" uniqKey="Pham H" first="H." last="Pham">H. Pham</name><affiliation wicri:level="2"><nlm:aff id="A1">Division of Viral Diseases, Centers for Disease Control and Prevention, Atlanta, GA, USA</nlm:aff><country xml:lang="fr">États-Unis</country><wicri:regionArea>Division of Viral Diseases, Centers for Disease Control and Prevention, Atlanta, GA</wicri:regionArea><placeName><region type="state">Géorgie (États-Unis)</region></placeName></affiliation></author><author><name sortKey="Kim, L" sort="Kim, L" uniqKey="Kim L" first="L." last="Kim">L. Kim</name><affiliation wicri:level="2"><nlm:aff id="A1">Division of Viral Diseases, Centers for Disease Control and Prevention, Atlanta, GA, USA</nlm:aff><country xml:lang="fr">États-Unis</country><wicri:regionArea>Division of Viral Diseases, Centers for Disease Control and Prevention, Atlanta, GA</wicri:regionArea><placeName><region type="state">Géorgie (États-Unis)</region></placeName></affiliation></author><author><name sortKey="Hall, A J" sort="Hall, A J" uniqKey="Hall A" first="A. J." last="Hall">A. J. Hall</name><affiliation wicri:level="2"><nlm:aff id="A1">Division of Viral Diseases, Centers for Disease Control and Prevention, Atlanta, GA, USA</nlm:aff><country xml:lang="fr">États-Unis</country><wicri:regionArea>Division of Viral Diseases, Centers for Disease Control and Prevention, Atlanta, GA</wicri:regionArea><placeName><region type="state">Géorgie (États-Unis)</region></placeName></affiliation></author><author><name sortKey="Gerber, S I" sort="Gerber, S I" uniqKey="Gerber S" first="S. I." last="Gerber">S. I. Gerber</name><affiliation wicri:level="2"><nlm:aff id="A1">Division of Viral Diseases, Centers for Disease Control and Prevention, Atlanta, GA, USA</nlm:aff><country xml:lang="fr">États-Unis</country><wicri:regionArea>Division of Viral Diseases, Centers for Disease Control and Prevention, Atlanta, GA</wicri:regionArea><placeName><region type="state">Géorgie (États-Unis)</region></placeName></affiliation></author><author><name sortKey="Al Hosani, F I" sort="Al Hosani, F I" uniqKey="Al Hosani F" first="F. I." last="Al Hosani">F. I. Al Hosani</name><affiliation wicri:level="1"><nlm:aff id="A4">Health Authority Abu Dhabi, Abu Dhabi, United Arab Emirates</nlm:aff><country xml:lang="fr">Émirats arabes unis</country><wicri:regionArea>Health Authority Abu Dhabi, Abu Dhabi</wicri:regionArea><wicri:noRegion>Abu Dhabi</wicri:noRegion></affiliation></author><author><name sortKey="Tong, S" sort="Tong, S" uniqKey="Tong S" first="S." last="Tong">S. Tong</name><affiliation wicri:level="2"><nlm:aff id="A1">Division of Viral Diseases, Centers for Disease Control and Prevention, Atlanta, GA, USA</nlm:aff><country xml:lang="fr">États-Unis</country><wicri:regionArea>Division of Viral Diseases, Centers for Disease Control and Prevention, Atlanta, GA</wicri:regionArea><placeName><region type="state">Géorgie (États-Unis)</region></placeName></affiliation></author><author><name sortKey="Al Muhairi, S S M" sort="Al Muhairi, S S M" uniqKey="Al Muhairi S" first="S. S. M." last="Al Muhairi">S. S. M. Al Muhairi</name><affiliation wicri:level="1"><nlm:aff id="A3">Abu Dhabi Food Control Authority, Abu Dhabi, United Arab Emirates</nlm:aff><country xml:lang="fr">Émirats arabes unis</country><wicri:regionArea>Abu Dhabi Food Control Authority, Abu Dhabi</wicri:regionArea><wicri:noRegion>Abu Dhabi</wicri:noRegion></affiliation></author></titleStmt><publicationStmt><idno type="wicri:source">PMC</idno><idno type="pmid">29239118</idno><idno type="pmc">5893383</idno><idno type="url">http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5893383</idno><idno type="RBID">PMC:5893383</idno><idno type="doi">10.1111/zph.12435</idno><date when="2017">2017</date><idno type="wicri:Area/Pmc/Corpus">001262</idno><idno type="wicri:explorRef" wicri:stream="Pmc" wicri:step="Corpus" wicri:corpus="PMC">001262</idno><idno type="wicri:Area/Pmc/Curation">001262</idno><idno type="wicri:explorRef" wicri:stream="Pmc" wicri:step="Curation">001262</idno><idno type="wicri:Area/Pmc/Checkpoint">000669</idno><idno type="wicri:explorRef" wicri:stream="Pmc" wicri:step="Checkpoint">000669</idno><idno type="wicri:source">PubMed</idno><idno type="RBID">pubmed:29239118</idno><idno type="wicri:Area/PubMed/Corpus">000A52</idno><idno type="wicri:explorRef" wicri:stream="PubMed" wicri:step="Corpus" wicri:corpus="PubMed">000A52</idno><idno type="wicri:Area/PubMed/Curation">000A52</idno><idno type="wicri:explorRef" wicri:stream="PubMed" wicri:step="Curation">000A52</idno><idno type="wicri:Area/PubMed/Checkpoint">000719</idno><idno type="wicri:explorRef" wicri:stream="Checkpoint" wicri:step="PubMed">000719</idno><idno type="wicri:Area/Ncbi/Merge">001C81</idno><idno type="wicri:Area/Ncbi/Curation">001C81</idno><idno type="wicri:Area/Ncbi/Checkpoint">001C81</idno><idno type="wicri:doubleKey">1863-1959:2017:Paden C:zoonotic:origin:and</idno><idno type="wicri:Area/Main/Merge">000B19</idno><idno type="wicri:Area/Main/Curation">000B16</idno><idno type="wicri:Area/Main/Exploration">000B16</idno></publicationStmt><sourceDesc><biblStruct><analytic><title xml:lang="en" level="a" type="main">Zoonotic origin and transmission of Middle East respiratory syndrome coronavirus in the UAE</title><author><name sortKey="Paden, C R" sort="Paden, C R" uniqKey="Paden C" first="C. R." last="Paden">C. R. Paden</name><affiliation wicri:level="2"><nlm:aff id="A1">Division of Viral Diseases, Centers for Disease Control and Prevention, Atlanta, GA, USA</nlm:aff><country xml:lang="fr">États-Unis</country><wicri:regionArea>Division of Viral Diseases, Centers for Disease Control and Prevention, Atlanta, GA</wicri:regionArea><placeName><region type="state">Géorgie (États-Unis)</region></placeName></affiliation><affiliation wicri:level="2"><nlm:aff id="A2">Oak Ridge Institute for Science Education, Oak Ridge, TN, USA</nlm:aff><country xml:lang="fr">États-Unis</country><wicri:regionArea>Oak Ridge Institute for Science Education, Oak Ridge, TN</wicri:regionArea><placeName><region type="state">Tennessee</region></placeName></affiliation></author><author><name sortKey="Yusof, M F B M" sort="Yusof, M F B M" uniqKey="Yusof M" first="M. F. B. M." last="Yusof">M. F. B. M. Yusof</name><affiliation wicri:level="1"><nlm:aff id="A3">Abu Dhabi Food Control Authority, Abu Dhabi, United Arab Emirates</nlm:aff><country xml:lang="fr">Émirats arabes unis</country><wicri:regionArea>Abu Dhabi Food Control Authority, Abu Dhabi</wicri:regionArea><wicri:noRegion>Abu Dhabi</wicri:noRegion></affiliation></author><author><name sortKey="Al Hammadi, Z M" sort="Al Hammadi, Z M" uniqKey="Al Hammadi Z" first="Z. M." last="Al Hammadi">Z. M. Al Hammadi</name><affiliation wicri:level="1"><nlm:aff id="A3">Abu Dhabi Food Control Authority, Abu Dhabi, United Arab Emirates</nlm:aff><country xml:lang="fr">Émirats arabes unis</country><wicri:regionArea>Abu Dhabi Food Control Authority, Abu Dhabi</wicri:regionArea><wicri:noRegion>Abu Dhabi</wicri:noRegion></affiliation></author><author><name sortKey="Queen, K" sort="Queen, K" uniqKey="Queen K" first="K." last="Queen">K. Queen</name><affiliation wicri:level="2"><nlm:aff id="A1">Division of Viral Diseases, Centers for Disease Control and Prevention, Atlanta, GA, USA</nlm:aff><country xml:lang="fr">États-Unis</country><wicri:regionArea>Division of Viral Diseases, Centers for Disease Control and Prevention, Atlanta, GA</wicri:regionArea><placeName><region type="state">Géorgie (États-Unis)</region></placeName></affiliation><affiliation wicri:level="2"><nlm:aff id="A2">Oak Ridge Institute for Science Education, Oak Ridge, TN, USA</nlm:aff><country xml:lang="fr">États-Unis</country><wicri:regionArea>Oak Ridge Institute for Science Education, Oak Ridge, TN</wicri:regionArea><placeName><region type="state">Tennessee</region></placeName></affiliation></author><author><name sortKey="Tao, Y" sort="Tao, Y" uniqKey="Tao Y" first="Y." last="Tao">Y. Tao</name><affiliation wicri:level="2"><nlm:aff id="A1">Division of Viral Diseases, Centers for Disease Control and Prevention, Atlanta, GA, USA</nlm:aff><country xml:lang="fr">États-Unis</country><wicri:regionArea>Division of Viral Diseases, Centers for Disease Control and Prevention, Atlanta, GA</wicri:regionArea><placeName><region type="state">Géorgie (États-Unis)</region></placeName></affiliation></author><author><name sortKey="Eltahir, Y M" sort="Eltahir, Y M" uniqKey="Eltahir Y" first="Y. M." last="Eltahir">Y. M. Eltahir</name><affiliation wicri:level="1"><nlm:aff id="A3">Abu Dhabi Food Control Authority, Abu Dhabi, United Arab Emirates</nlm:aff><country xml:lang="fr">Émirats arabes unis</country><wicri:regionArea>Abu Dhabi Food Control Authority, Abu Dhabi</wicri:regionArea><wicri:noRegion>Abu Dhabi</wicri:noRegion></affiliation></author><author><name sortKey="Elsayed, E A" sort="Elsayed, E A" uniqKey="Elsayed E" first="E. A." last="Elsayed">E. A. Elsayed</name><affiliation wicri:level="1"><nlm:aff id="A3">Abu Dhabi Food Control Authority, Abu Dhabi, United Arab Emirates</nlm:aff><country xml:lang="fr">Émirats arabes unis</country><wicri:regionArea>Abu Dhabi Food Control Authority, Abu Dhabi</wicri:regionArea><wicri:noRegion>Abu Dhabi</wicri:noRegion></affiliation></author><author><name sortKey="Marzoug, B A" sort="Marzoug, B A" uniqKey="Marzoug B" first="B. A." last="Marzoug">B. A. Marzoug</name><affiliation wicri:level="1"><nlm:aff id="A3">Abu Dhabi Food Control Authority, Abu Dhabi, United Arab Emirates</nlm:aff><country xml:lang="fr">Émirats arabes unis</country><wicri:regionArea>Abu Dhabi Food Control Authority, Abu Dhabi</wicri:regionArea><wicri:noRegion>Abu Dhabi</wicri:noRegion></affiliation></author><author><name sortKey="Bensalah, O K A" sort="Bensalah, O K A" uniqKey="Bensalah O" first="O. K. A." last="Bensalah">O. K. A. Bensalah</name><affiliation wicri:level="1"><nlm:aff id="A3">Abu Dhabi Food Control Authority, Abu Dhabi, United Arab Emirates</nlm:aff><country xml:lang="fr">Émirats arabes unis</country><wicri:regionArea>Abu Dhabi Food Control Authority, Abu Dhabi</wicri:regionArea><wicri:noRegion>Abu Dhabi</wicri:noRegion></affiliation></author><author><name sortKey="Khalafalla, A I" sort="Khalafalla, A I" uniqKey="Khalafalla A" first="A. I." last="Khalafalla">A. I. Khalafalla</name><affiliation wicri:level="1"><nlm:aff id="A3">Abu Dhabi Food Control Authority, Abu Dhabi, United Arab Emirates</nlm:aff><country xml:lang="fr">Émirats arabes unis</country><wicri:regionArea>Abu Dhabi Food Control Authority, Abu Dhabi</wicri:regionArea><wicri:noRegion>Abu Dhabi</wicri:noRegion></affiliation></author><author><name sortKey="Al Mulla, M" sort="Al Mulla, M" uniqKey="Al Mulla M" first="M." last="Al Mulla">M. Al Mulla</name><affiliation wicri:level="1"><nlm:aff id="A4">Health Authority Abu Dhabi, Abu Dhabi, United Arab Emirates</nlm:aff><country xml:lang="fr">Émirats arabes unis</country><wicri:regionArea>Health Authority Abu Dhabi, Abu Dhabi</wicri:regionArea><wicri:noRegion>Abu Dhabi</wicri:noRegion></affiliation></author><author><name sortKey="Khudhair, A" sort="Khudhair, A" uniqKey="Khudhair A" first="A." last="Khudhair">A. Khudhair</name><affiliation wicri:level="1"><nlm:aff id="A4">Health Authority Abu Dhabi, Abu Dhabi, United Arab Emirates</nlm:aff><country xml:lang="fr">Émirats arabes unis</country><wicri:regionArea>Health Authority Abu Dhabi, Abu Dhabi</wicri:regionArea><wicri:noRegion>Abu Dhabi</wicri:noRegion></affiliation></author><author><name sortKey="Elkheir, K A" sort="Elkheir, K A" uniqKey="Elkheir K" first="K. A." last="Elkheir">K. A. Elkheir</name><affiliation wicri:level="1"><nlm:aff id="A4">Health Authority Abu Dhabi, Abu Dhabi, United Arab Emirates</nlm:aff><country xml:lang="fr">Émirats arabes unis</country><wicri:regionArea>Health Authority Abu Dhabi, Abu Dhabi</wicri:regionArea><wicri:noRegion>Abu Dhabi</wicri:noRegion></affiliation></author><author><name sortKey="Issa, Z B" sort="Issa, Z B" uniqKey="Issa Z" first="Z. B." last="Issa">Z. B. Issa</name><affiliation wicri:level="1"><nlm:aff id="A4">Health Authority Abu Dhabi, Abu Dhabi, United Arab Emirates</nlm:aff><country xml:lang="fr">Émirats arabes unis</country><wicri:regionArea>Health Authority Abu Dhabi, Abu Dhabi</wicri:regionArea><wicri:noRegion>Abu Dhabi</wicri:noRegion></affiliation></author><author><name sortKey="Pradeep, K" sort="Pradeep, K" uniqKey="Pradeep K" first="K." last="Pradeep">K. Pradeep</name><affiliation wicri:level="1"><nlm:aff id="A4">Health Authority Abu Dhabi, Abu Dhabi, United Arab Emirates</nlm:aff><country xml:lang="fr">Émirats arabes unis</country><wicri:regionArea>Health Authority Abu Dhabi, Abu Dhabi</wicri:regionArea><wicri:noRegion>Abu Dhabi</wicri:noRegion></affiliation></author><author><name sortKey="Elsaleh, F N" sort="Elsaleh, F N" uniqKey="Elsaleh F" first="F. N." last="Elsaleh">F. N. Elsaleh</name><affiliation wicri:level="1"><nlm:aff id="A4">Health Authority Abu Dhabi, Abu Dhabi, United Arab Emirates</nlm:aff><country xml:lang="fr">Émirats arabes unis</country><wicri:regionArea>Health Authority Abu Dhabi, Abu Dhabi</wicri:regionArea><wicri:noRegion>Abu Dhabi</wicri:noRegion></affiliation></author><author><name sortKey="Imambaccus, H" sort="Imambaccus, H" uniqKey="Imambaccus H" first="H." last="Imambaccus">H. Imambaccus</name><affiliation wicri:level="1"><nlm:aff id="A5">Sheikh Khalifa Medical City, Abu Dhabi, United Arab Emirates</nlm:aff><country xml:lang="fr">Émirats arabes unis</country><wicri:regionArea>Sheikh Khalifa Medical City, Abu Dhabi</wicri:regionArea><wicri:noRegion>Abu Dhabi</wicri:noRegion></affiliation></author><author><name sortKey="Sasse, J" sort="Sasse, J" uniqKey="Sasse J" first="J." last="Sasse">J. Sasse</name><affiliation wicri:level="1"><nlm:aff id="A5">Sheikh Khalifa Medical City, Abu Dhabi, United Arab Emirates</nlm:aff><country xml:lang="fr">Émirats arabes unis</country><wicri:regionArea>Sheikh Khalifa Medical City, Abu Dhabi</wicri:regionArea><wicri:noRegion>Abu Dhabi</wicri:noRegion></affiliation></author><author><name sortKey="Weber, S" sort="Weber, S" uniqKey="Weber S" first="S." last="Weber">S. Weber</name><affiliation wicri:level="1"><nlm:aff id="A5">Sheikh Khalifa Medical City, Abu Dhabi, United Arab Emirates</nlm:aff><country xml:lang="fr">Émirats arabes unis</country><wicri:regionArea>Sheikh Khalifa Medical City, Abu Dhabi</wicri:regionArea><wicri:noRegion>Abu Dhabi</wicri:noRegion></affiliation></author><author><name sortKey="Shi, M" sort="Shi, M" uniqKey="Shi M" first="M." last="Shi">M. Shi</name><affiliation wicri:level="4"><nlm:aff id="A6">The University of Sydney, Sydney, NSW, Australia</nlm:aff><country xml:lang="fr">Australie</country><wicri:regionArea>The University of Sydney, Sydney, NSW</wicri:regionArea><orgName type="university">Université de Sydney</orgName><placeName><settlement type="city">Sydney</settlement><region type="état">Nouvelle-Galles du Sud</region></placeName></affiliation></author><author><name sortKey="Zhang, J" sort="Zhang, J" uniqKey="Zhang J" first="J." last="Zhang">J. Zhang</name><affiliation wicri:level="2"><nlm:aff id="A1">Division of Viral Diseases, Centers for Disease Control and Prevention, Atlanta, GA, USA</nlm:aff><country xml:lang="fr">États-Unis</country><wicri:regionArea>Division of Viral Diseases, Centers for Disease Control and Prevention, Atlanta, GA</wicri:regionArea><placeName><region type="state">Géorgie (États-Unis)</region></placeName></affiliation></author><author><name sortKey="Li, Y" sort="Li, Y" uniqKey="Li Y" first="Y." last="Li">Y. Li</name><affiliation wicri:level="2"><nlm:aff id="A1">Division of Viral Diseases, Centers for Disease Control and Prevention, Atlanta, GA, USA</nlm:aff><country xml:lang="fr">États-Unis</country><wicri:regionArea>Division of Viral Diseases, Centers for Disease Control and Prevention, Atlanta, GA</wicri:regionArea><placeName><region type="state">Géorgie (États-Unis)</region></placeName></affiliation></author><author><name sortKey="Pham, H" sort="Pham, H" uniqKey="Pham H" first="H." last="Pham">H. Pham</name><affiliation wicri:level="2"><nlm:aff id="A1">Division of Viral Diseases, Centers for Disease Control and Prevention, Atlanta, GA, USA</nlm:aff><country xml:lang="fr">États-Unis</country><wicri:regionArea>Division of Viral Diseases, Centers for Disease Control and Prevention, Atlanta, GA</wicri:regionArea><placeName><region type="state">Géorgie (États-Unis)</region></placeName></affiliation></author><author><name sortKey="Kim, L" sort="Kim, L" uniqKey="Kim L" first="L." last="Kim">L. Kim</name><affiliation wicri:level="2"><nlm:aff id="A1">Division of Viral Diseases, Centers for Disease Control and Prevention, Atlanta, GA, USA</nlm:aff><country xml:lang="fr">États-Unis</country><wicri:regionArea>Division of Viral Diseases, Centers for Disease Control and Prevention, Atlanta, GA</wicri:regionArea><placeName><region type="state">Géorgie (États-Unis)</region></placeName></affiliation></author><author><name sortKey="Hall, A J" sort="Hall, A J" uniqKey="Hall A" first="A. J." last="Hall">A. J. Hall</name><affiliation wicri:level="2"><nlm:aff id="A1">Division of Viral Diseases, Centers for Disease Control and Prevention, Atlanta, GA, USA</nlm:aff><country xml:lang="fr">États-Unis</country><wicri:regionArea>Division of Viral Diseases, Centers for Disease Control and Prevention, Atlanta, GA</wicri:regionArea><placeName><region type="state">Géorgie (États-Unis)</region></placeName></affiliation></author><author><name sortKey="Gerber, S I" sort="Gerber, S I" uniqKey="Gerber S" first="S. I." last="Gerber">S. I. Gerber</name><affiliation wicri:level="2"><nlm:aff id="A1">Division of Viral Diseases, Centers for Disease Control and Prevention, Atlanta, GA, USA</nlm:aff><country xml:lang="fr">États-Unis</country><wicri:regionArea>Division of Viral Diseases, Centers for Disease Control and Prevention, Atlanta, GA</wicri:regionArea><placeName><region type="state">Géorgie (États-Unis)</region></placeName></affiliation></author><author><name sortKey="Al Hosani, F I" sort="Al Hosani, F I" uniqKey="Al Hosani F" first="F. I." last="Al Hosani">F. I. Al Hosani</name><affiliation wicri:level="1"><nlm:aff id="A4">Health Authority Abu Dhabi, Abu Dhabi, United Arab Emirates</nlm:aff><country xml:lang="fr">Émirats arabes unis</country><wicri:regionArea>Health Authority Abu Dhabi, Abu Dhabi</wicri:regionArea><wicri:noRegion>Abu Dhabi</wicri:noRegion></affiliation></author><author><name sortKey="Tong, S" sort="Tong, S" uniqKey="Tong S" first="S." last="Tong">S. Tong</name><affiliation wicri:level="2"><nlm:aff id="A1">Division of Viral Diseases, Centers for Disease Control and Prevention, Atlanta, GA, USA</nlm:aff><country xml:lang="fr">États-Unis</country><wicri:regionArea>Division of Viral Diseases, Centers for Disease Control and Prevention, Atlanta, GA</wicri:regionArea><placeName><region type="state">Géorgie (États-Unis)</region></placeName></affiliation></author><author><name sortKey="Al Muhairi, S S M" sort="Al Muhairi, S S M" uniqKey="Al Muhairi S" first="S. S. M." last="Al Muhairi">S. S. M. Al Muhairi</name><affiliation wicri:level="1"><nlm:aff id="A3">Abu Dhabi Food Control Authority, Abu Dhabi, United Arab Emirates</nlm:aff><country xml:lang="fr">Émirats arabes unis</country><wicri:regionArea>Abu Dhabi Food Control Authority, Abu Dhabi</wicri:regionArea><wicri:noRegion>Abu Dhabi</wicri:noRegion></affiliation></author></analytic><series><title level="j">Zoonoses and public health</title><idno type="ISSN">1863-1959</idno><idno type="eISSN">1863-2378</idno><imprint><date when="2017">2017</date></imprint></series></biblStruct></sourceDesc></fileDesc><profileDesc><textClass><keywords scheme="KwdEn" xml:lang="en"><term>Animals</term><term>Camelus (virology)</term><term>Coronavirus Infections (epidemiology)</term><term>Coronavirus Infections (virology)</term><term>Genome, Viral</term><term>Humans</term><term>Middle East Respiratory Syndrome Coronavirus (genetics)</term><term>Phylogeny</term><term>United Arab Emirates (epidemiology)</term><term>Zoonoses (transmission)</term></keywords><keywords scheme="KwdFr" xml:lang="fr"><term>Animaux</term><term>Chameaux (virologie)</term><term>Coronavirus du syndrome respiratoire du Moyen-Orient (génétique)</term><term>Génome viral</term><term>Humains</term><term>Infections à coronavirus (virologie)</term><term>Infections à coronavirus (épidémiologie)</term><term>Phylogénie</term><term>Zoonoses (transmission)</term><term>Émirats arabes unis (épidémiologie)</term></keywords><keywords scheme="MESH" qualifier="epidemiology" xml:lang="en"><term>Coronavirus Infections</term><term>United Arab Emirates</term></keywords><keywords scheme="MESH" qualifier="genetics" xml:lang="en"><term>Middle East Respiratory Syndrome Coronavirus</term></keywords><keywords scheme="MESH" qualifier="génétique" xml:lang="fr"><term>Coronavirus du syndrome respiratoire du Moyen-Orient</term></keywords><keywords scheme="MESH" qualifier="transmission" xml:lang="en"><term>Zoonoses</term></keywords><keywords scheme="MESH" qualifier="virologie" xml:lang="fr"><term>Chameaux</term><term>Infections à coronavirus</term></keywords><keywords scheme="MESH" qualifier="virology" xml:lang="en"><term>Camelus</term><term>Coronavirus Infections</term></keywords><keywords scheme="MESH" qualifier="épidémiologie" xml:lang="fr"><term>Infections à coronavirus</term><term>Zoonoses</term><term>Émirats arabes unis</term></keywords><keywords scheme="MESH" xml:lang="en"><term>Animals</term><term>Genome, Viral</term><term>Humans</term><term>Phylogeny</term></keywords><keywords scheme="MESH" xml:lang="fr"><term>Animaux</term><term>Génome viral</term><term>Humains</term><term>Phylogénie</term></keywords></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en"><title>Summary</title><p id="P1">Since the emergence of Middle East respiratory syndrome coronavirus (MERS-CoV) in 2012, there have been a number of clusters of human-to-human transmission. These cases of human-to-human transmission involve close contact and have occurred primarily in healthcare settings, and they are suspected to result from repeated zoonotic introductions. In this study, we sequenced whole MERS-CoV genomes directly from respiratory samples collected from 23 confirmed MERS cases in the United Arab Emirates (UAE). These samples included cases from three nosocomial and three household clusters. The sequences were analysed for changes and relatedness with regard to the collected epidemiological data and other available MERS-CoV genomic data. Sequence analysis supports the epidemiological data within the clusters, and further, suggests that these clusters emerged independently. To understand how and when these clusters emerged, respiratory samples were taken from dromedary camels, a known host of MERS-CoV, in the same geographic regions as the human clusters. Middle East respiratory syndrome coronavirus genomes from six virus-positive animals were sequenced, and these genomes were nearly identical to those found in human patients from corresponding regions. These data demonstrate a genetic link for each of these clusters to a camel and support the hypothesis that human MERS-CoV diversity results from multiple zoonotic introductions.</p></div></front><back><div1 type="bibliography"><listBibl><biblStruct><analytic><author><name sortKey="Adney, Dr" uniqKey="Adney D">DR Adney</name></author><author><name sortKey="Van Doremalen, N" uniqKey="Van Doremalen N">N van Doremalen</name></author><author><name sortKey="Brown, Vr" uniqKey="Brown V">VR Brown</name></author><author><name sortKey="Bushmaker, T" uniqKey="Bushmaker T">T Bushmaker</name></author><author><name sortKey="Scott, D" uniqKey="Scott D">D Scott</name></author><author><name sortKey="De Wit, E" uniqKey="De Wit E">E de Wit</name></author><author><name sortKey=" Munster, Vj" uniqKey=" Munster V">VJ … Munster</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Al Hammadi, Zm" uniqKey="Al Hammadi Z">ZM Al Hammadi</name></author><author><name sortKey="Chu, 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Tong</name><name sortKey="Zhang, J" sort="Zhang, J" uniqKey="Zhang J" first="J." last="Zhang">J. Zhang</name></country><country name="Émirats arabes unis"><noRegion><name sortKey="Yusof, M F B M" sort="Yusof, M F B M" uniqKey="Yusof M" first="M. F. B. M." last="Yusof">M. F. B. M. Yusof</name></noRegion><name sortKey="Al Hammadi, Z M" sort="Al Hammadi, Z M" uniqKey="Al Hammadi Z" first="Z. M." last="Al Hammadi">Z. M. Al Hammadi</name><name sortKey="Al Hosani, F I" sort="Al Hosani, F I" uniqKey="Al Hosani F" first="F. I." last="Al Hosani">F. I. Al Hosani</name><name sortKey="Al Muhairi, S S M" sort="Al Muhairi, S S M" uniqKey="Al Muhairi S" first="S. S. M." last="Al Muhairi">S. S. M. Al Muhairi</name><name sortKey="Al Mulla, M" sort="Al Mulla, M" uniqKey="Al Mulla M" first="M." last="Al Mulla">M. Al Mulla</name><name sortKey="Bensalah, O K A" sort="Bensalah, O K A" uniqKey="Bensalah O" first="O. K. A." last="Bensalah">O. K. A. Bensalah</name><name sortKey="Elkheir, K A" sort="Elkheir, K A" uniqKey="Elkheir K" first="K. A." last="Elkheir">K. A. Elkheir</name><name sortKey="Elsaleh, F N" sort="Elsaleh, F N" uniqKey="Elsaleh F" first="F. N." last="Elsaleh">F. N. Elsaleh</name><name sortKey="Elsayed, E A" sort="Elsayed, E A" uniqKey="Elsayed E" first="E. A." last="Elsayed">E. A. Elsayed</name><name sortKey="Eltahir, Y M" sort="Eltahir, Y M" uniqKey="Eltahir Y" first="Y. M." last="Eltahir">Y. M. Eltahir</name><name sortKey="Imambaccus, H" sort="Imambaccus, H" uniqKey="Imambaccus H" first="H." last="Imambaccus">H. Imambaccus</name><name sortKey="Issa, Z B" sort="Issa, Z B" uniqKey="Issa Z" first="Z. B." last="Issa">Z. B. Issa</name><name sortKey="Khalafalla, A I" sort="Khalafalla, A I" uniqKey="Khalafalla A" first="A. I." last="Khalafalla">A. I. Khalafalla</name><name sortKey="Khudhair, A" sort="Khudhair, A" uniqKey="Khudhair A" first="A." last="Khudhair">A. Khudhair</name><name sortKey="Marzoug, B A" sort="Marzoug, B A" uniqKey="Marzoug B" first="B. A." last="Marzoug">B. A. Marzoug</name><name sortKey="Pradeep, K" sort="Pradeep, K" uniqKey="Pradeep K" first="K." last="Pradeep">K. Pradeep</name><name sortKey="Sasse, J" sort="Sasse, J" uniqKey="Sasse J" first="J." last="Sasse">J. Sasse</name><name sortKey="Weber, S" sort="Weber, S" uniqKey="Weber S" first="S." last="Weber">S. Weber</name></country><country name="Australie"><region name="Nouvelle-Galles du Sud"><name sortKey="Shi, M" sort="Shi, M" uniqKey="Shi M" first="M." last="Shi">M. Shi</name></region></country></tree></affiliations></record>Pour manipuler ce document sous Unix (Dilib)
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